All functions

adj_age_samples()

Test age sampling magnitude

age_error()

Resample reader/tester data to implement ageing error.

al_variab()

Resample age-length data to implement growth variability in age-length key.

apop()

Compute population at age

apop_caal()

Compute conditional age-at-length.

bias_age()

calculate bias in bootstrapped age composition

bias_caal()

calculate bias in bootstrapped conditional age-at-length

bias_length()

calculate bias in bootstrapped length composition

boot_age()

Resample age data w/replacement.

boot_haul()

Resample hauls w/replacement.

boot_length()

Resample length frequency data w/replacement.

comp_stats()

Compute surveyISS statistics

comp_stats_caal()

Compute surveyISS statistics

grwth_stats()

calculate mean and SD in length-at-age

iss_age()

Calculate age composition input sampled size (iss)

iss_caal()

Calculate conditional age-at-length input sampled size (iss)

iss_length()

Calculate length composition input sampled size (iss)

lpop()

Compute population at length

query_data()

Query data to run surveyISS

query_data_t3()

Wrapper function to query data

read_test

Age and growth lab reader-tester paired otolith data

reduce_samples()

reduce total number of lengths or ages

red_len_samples()

Reduce length frequency samples

rss_age()

Calculate age composition realized sampled size (rss)

rss_caal()

Calculate conditional age-at-length realized sampled size (rss)

rss_length()

Calculate length composition realized sampled size (rss)

srvy_comps()

Resample data and compute length and age population expansion

srvy_comps_ai_cmplx()

Resample data and compute length and age population expansion

srvy_comps_caal()

Resample data and compute conditional age-at-length

srvy_iss()

Survey input sample size function

srvy_iss_ai_cmplx()

Stock complex survey input sample size function

srvy_iss_ai_subreg()

Spatially-explicit survey input sample size function

srvy_iss_caal()

Survey input sample size function

srvy_iss_goa_cmplx()

Stock complex survey input sample size function

srvy_iss_goa_wc_e()

Spatially-explicit survey input sample size function

srvy_iss_goa_w_c_e()

Spatially-explicit survey input sample size function

srvy_iss_w140()

Survey input sample size function